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CEF Full Publication List 2006-2015
(last update: March 2015)

Ab E, Atkinson AR, Banci L, Bertini I, Ciofi-Baffoni S, Brunner K, Diercks T, Dötsch V, Engelke F, Folkers GE, Griesinger C, Gronwald W, Gunther U, Habeck M, de Jong RN, Kalbitzer HR, Kieffer B, Leeflang BR, Loss S, Luchinat C, Marquardsen T, Moskau D, Neidig KP, Nilges M, Piccioli M, Pierattelli R, Rieping W, Schippmann T, Schwalbe H, Trave G, Trenner J, Wöhnert J, Zweckstetter M, Kaptein R (2006) NMR in the SPINE structural proteomics project. Acta Crystallogr D 62:1150-1161

Abdel-Rahman U, Risteski P, Tizi K, Kerscher S, Bejati S, Zwicker K, Scholz M, Brandt U, Moritz A (2009) Hypoxic reoxygenation during initial reperfusion attenuates cardiac dysfunction and limits ischemia-reperfusion injury after cardioplegic arrest in a porcine model. J Thorac Cardiov Sur 137:978-982

Abdrakhmanova A, Zwicker K, Kerscher S, Zickermann V, Brandt U (2006) Tight binding of NADPH to the 39-kDa subunit of complex I is not required for catalytic activity but stabilizes the multiprotein complex. BBA-Bioenergetics 1757:1676-1682

Abele R, Tampé R (2006) Modulation of the antigen transport machinery TAP by friends and enemies. FEBS Lett 580:1156-1163

Abele R, Tampé R (2009) Peptide trafficking and translocation across membranes in cellular signaling and self-defense strategies. Curr Opin Cell Biol 21:508-515

Abhari BA, Cristofanon S, Kappler R, von Schweinitz D, Humphreys R, Fulda S (2013) RIP1 is required for IAP inhibitor-mediated sensitization for TRAIL-induced apoptosis via a RIP1/FADD/caspase-8 cell death complex. Oncogene 32:3263-3273

Ackermann D, Rasched G, Verma S, Schmidt TL, Heckel A, Famulok M (2010) Assembly of dsDNA nanocircles into dimeric and oligomeric aggregates. Chem Commun 46:4154-4156

Ackermann D, Schmidt TL, Hannam JS, Purohit CS, Heckel A, Famulok M (2010) A double-stranded DNA rotaxane. Nat Nanotechnol 5:436-442

Ackermann J, Einloft J, Nothen J, Koch I (2012) Reduction techniques for network validation in systems biology. J Theor Biol 315:71-80

Adriano N, Iachelli V, Mirabile E, Marschalek R, Meyer C, Tamburino L, Lo Nigro L (2014) Backtracking MLL-AF6 and mutations in KRAS-MAPK pathway in a child with acute myelomonocytic Leukemia (AMML): what's happened in utero? J Pediatr Hematol Oncol 36:E262-E262

Ahlmann M, Meyer C, Marschalek R, Burkhardt B, Koehler G, Klapper W, Juergens H, Rossig C (2014) Complex MLL rearrangement in non-infiltrated bone marrow in an infant with stage II precursor B-lymphoblastic lymphoma. Eur J Haematol 93:349-353

Aisenbrey C, Sizun C, Koch J, Herget M, Abele R, Bechinger B, Tampé R (2006) Structure and dynamics of membrane-associated ICP47, a viral inhibitor of the MHC I antigen-processing machinery. J Biol Chem 281:30365-30372

Aivaliotis M, Haase W, Karas M, Tsiotis G (2006) Proteomic analysis of chlorosome-depleted membrane of the green sulfur bacterium Chlorobium tepidum. Proteomics 6:217-232

Aivaliotis M, Karas M, Tsiotis G (2006) High throughput two-dimensional blue-native electrophoresis: a tool for functional proteomics of cytoplasmatic protein complexes from Chlorobium tepidum. Photosynth Res 88:143-157

Aivaliotis M, Karas M, Tsiotis G (2007) An alternative strategy for the membrane proteome analysis of the green sulfur bacterium Chlorobium tepidum using blue native PAGE and 2-D PAGE on purified membranes. J Proteome Res 6:1048-1058

Aizenberg M, Schuman EM (2011) Cerebellar-dependent learning in larval zebrafish. J Neurosci 31:8708-8712

Akbalik G, Schuman EM (2014) mRNA, live and unmasked. Science 343:375-376

Akerboom J, Carreras Calderon N, Tian L, Wabnig S, Prigge M, Tolo J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schuler C, Chen T-W, Sarkisyan KS, Marvin JS, Bargmann CI, Kim DS, Kugler S, Lagnado L, Hegemann P, Gottschalk A, Schreiter ER, Looger LL (2013) Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci 6:2

Akesson P, Herwald H, Rasmussen M, Hakansson K, Abrahamson M, Hasan AAK, Schmaier AH, Müller-Esterl W, Bjorck L (2010) Streptococcal inhibitor of complement-mediated lysis (SIC): an anti-inflammatory virulence determinant. Microbiology 156:3660-8

Al-Amoudi A, Castaño-Diez D, Devos DP, Russell RB, Johnson GT, Frangakis AS (2011) The three-dimensional molecular structure of the desmosomal plaque. P Natl Acad Sci USA 108:6480-6485

Al-Amoudi A, Diez DC, Betts MJ, Frangakis AS (2007) The molecular architecture of cadherins in native epidermal desmosomes. Nature 450:832-837

Al-Amoudi A, Frangakis AS (2008) Structural studies on desmosomes. Biochem Soc T 36:181-187

Al-Amoudi A, Frangakis AS (2013) Three-dimensional visualization of the molecular architecture of cell-cell junctions in situ by cryo-electron tomography of vitreous sections. Methods Mol Biol 961:97-117

Albers SV, Jonuscheit M, Dinkelaker S, Urich T, Kletzin A, Tampé R, Driessen AJM, Schleper C (2006) Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus. Appl Environ Microb 72:102-111

Albert D, Pergola C, Koeberle A, Dodt G, Steinhilber D, Werz O (2008) The role of diacylglyceride generation by phospholipase D and phosphatidic acid phosphatase in the activation of 5-lipoxygenase in polymorphonuclear leukocytes. J Leukocyte Biol 83:1019-1027

Aleksandrov DA, Zagryagskaya AN, Pushkareva MA, Bachschmid M, Peters-Golden M, Werz O, Steinhilber D, Sud'ina GF (2006) Cholesterol and its anionic derivatives inhibit 5-lipoxygenase activation in polymorphonuclear leukocytes and MonoMac6 cells. FEBS J 273:548-557

Al-Jawabreh A, Diezmann S, Müller M, Wirth T, Schnur LF, Strelkova MV, Kovalenko DA, Razakov SA, Schwenkenbecher J, Kuhls K, Schonian G (2008) Identification of geographically distributed sub-populations of Leishmania (Leishmania) major by microsatellite analysis. BMC Evol Biol 8
Allegretti M, Mills DJ, McMullan G, Kühlbrandt W, Vonck J (2014) Atomic model of the F420-reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector. eLife 3:e1963

Almedom RB, Liewald JF, Hernando G, Schultheis C, Rayes D, Pan J, Schedletzky T, Hutter H, Bouzat C, Gottschalk A (2009) An ER-resident membrane protein complex regulates nicotinic acetylcholine receptor subunit composition at the synapse. EMBO J 28:2636-2649

Alonso CN, Meyer C, Gallego MS, Rossi JG, Mansini AP, Rubio PL, Medina A, Marschalek R, Felice MS (2010) BTBD18: A novel MLL partner gene in an infant with acute lymphoblastic leukemia and inv(11)(q13;q23). Leukemia Res 34:E294-E296

Alonso JM, Reichel A, Piehler J, del Campo A (2008) Photopatterned surfaces for site-specific and functional immobilization of proteins. Langmuir 24:448-457

Althoff T, Davies KM, Schulze S, Joos F, Kühlbrandt W (2012) GRecon: a method for the lipid reconstitution of membrane proteins. Angew Chem Int Edit 51:8343-8347

Altmann KH, Buchner J, Kessler H, Diederich F, Krautler B, Lippard S, Liskamp R, Muller K, Nolan EM, Samori B, Schneider G, Schreiber SL, Schwalbe H, Toniolo C, van Boeckel CAA, Waldmann H, Walsh CT (2009) The state of the art of chemical biology. ChemBioChem 10:16-29

Amarie S, Arefe K, Starcke JH, Dreuw A, Wachtveitl J (2008) Identification of an additional low-lying excited state of carotenoid radical cations. J Phys Chem B 112:14011-14017

Amarie S, Förster U, Gildenhoff N, Dreuw A, Wachtveitl J (2010) Excited state dynamics of the astaxanthin radical cation. Chem Phys 373:8-14

Amarie S, Lupo D, Lenz MO, Saegesser R, Ghosh R, Wachtveitl J (2010) Excitation energy pathways in the photosynthetic units of reaction center LM- and H-subunit deletion mutants of Rhodospirillum rubrum. Photosynth Res 103:141-151

Amarie S, Standfuss J, Barros T, Kühlbrandt W, Dreuw A, Wachtveitl J (2007) Carotenoid radical cations as a probe for the molecular mechanism of nonphotochemical quenching in oxygenic photosynthesis. J Phys Chem B 111:3481-3487

Amarie S, Wilk L, Barros T, Kühlbrandt W, Dreuw A, Wachtveitl J (2009) Properties of zeaxanthin and its radical cation bound to the minor light-harvesting complexes CP24, CP26 and CP29. BBA-Bioenergetics 1787:747-752

Amrani N, Sachs MS, Jacobson A (2006) Early nonsense: mRNA decay solves a translational problem. Nat Rev Mol Cell Biol 7:415-425

Andre M, Karas M (2007) Investigation of sample-purification procedures for MALDI-based proteomic studies. Anal Bioanal Chem 389:1047-1053

André N, Cherouati N, Prual C, Steffan T, Zeder-Lutz G, Magnin T, Pattus F, Michel H, Wagner R, Reinhart C (2006) Enhancing functional production of G protein-coupled receptors in Pichia pastoris to levels required for structural studies via a single expression screen. Protein Sci 15:1115-1126

Andre T, Reichel A, Wiesmuller KH, Tampé R, Piehler J, Brock R (2009) Selectivity of competitive multivalent interactions at interfaces. ChemBioChem 10:1878-1887

Angelini R, Vitale R, Patil VA, Cocco T, Ludwig B, Greenberg ML, Corcelli A (2012) Lipidomics of intact mitochondria by MALDI-TOF/MS. J Lipid Res 53:1417-1425

Angerer H, Nasiri HR, NiedergesaSs V, Kerscher S, Schwalbe H, Brandt U (2012) Tracing the tail of ubiquinone in mitochondrial complex I. BBA-Bioenergetics 1817:1776-1784

Angerer H, Radermacher M, Malkowska M, Steger M, Zwicker K, Heide H, Wittig I, Brandt U, Zickermann V (2014) The LYR protein subunit NB4M/NDUFA6 of mitochondrial complex I anchors an acyl carrier protein and is essential for catalytic activity. Proc Nati Acad of Sci USA 111:5207-5212

Angerer H, Zwicker K, Wumaier Z, Sokolova L, Heide H, Steger M, Kaiser S, Nubel E, Brutschy B, Radermacher M, Brandt U, Zickermann V (2011) A scaffold of accessory subunits links the peripheral arm and the distal proton-pumping module of mitochondrial complex I. Biochem J 437:279-288

Angrand PO, Segura I, Volkel P, Ghidelli S, Terry R, Brajenovic M, Vintersten K, Klein R, Superti-Furga G, Drewes G, Kuster B, Bouwmeester T, Acker-Palmer A (2006) Transgenic mouse proteomics identifies new 14-3-3-associated proteins involved in cytoskeletal rearrangements and cell signaling. Mol Cell Proteomics 5:2211-2227

Änkö ML, Müller-McNicoll M, Brandl H, Curk T, Gorup C, Henry I, Ule J, Neugebauer KM (2012) The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes. Genome Biol 13:article number: R17

Ansari N, Muller S, Stelzer EHK, Pampaloni F (2013) Quantitative 3D cell-based assay performed with cellular spheroids and fluorescence microscopy. Method Cell Biol 113:295-309

Anselmi C, Grininger M, Gipson P, Faraldo-Gómez JD (2010) Mechanism of substrate shuttling by the acyl-carrier protein within the fatty acid mega-synthase. J Am Chem Soc 132:12357-12364

Anselmi C, Zhou WC, Pos KM, Faraldo-Gomez JD (2014) Alternating-access mechanism of the proton-drug antiporter AcrB. Biophys J 106:367A-368A

Antion MD, Merhav M, Hoeffer CA, Reis G, Kozma SC, Thomas G, Schuman EM, Rosenblum K, Klann E (2008) Removal of S6K1 and S6K2 leads to divergent alterations in learning, memory, and synaptic plasticity. Learn Memory 15:29-38

Antos JM, Popp MWL, Ernst R, Chew GL, Spooner E, Ploegh HL (2009) A straight path to circular proteins. J Biol Chem 284:16028-16036

Appel M, Hizlan D, Vinothkumar KR, Ziegler C, Kühlbrandt W (2009) Conformations of NhaA, the Na/H exchanger from Escherichia coli, in the pH-activated and ion-translocating states. J Mol Biol 386:351-365

Appelhans D, Oertel U, Mazzeo R, Komber H, Hoffmann J, Weidner S, Brutschy B, Voit B, Francesca Ottaviani M (2009) Dense-shell glycodendrimers: UV/Vis and electron paramagnetic resonance study of metal ion complexation. P Roy Soc A-Math Phy 466:1489-1513

Appelhans D, Zhong Y, Kornber H, Friedel P, Oertel U, Scheler U, Morgner N, Kuckling D, Richter S, Seidel J, Brutschy B, Voit B (2007) Oligosaccharide-modified poly(propyleneimine) dendrimers: Synthesis, structure determination, and Cu-II complexation. Macromol Biosci 7:373-383

Arancibia S, Espinoza C, Salazar F, Del Campo M, Tampé R, Zhong TY, De Ioannes P, Moltedo B, Ferreira J, Lavelle EC, Manubens A, De Ioannes AE, Becker MI (2014) A novel immunomodulatory hemocyanin from the limpet Fissurella latimarginata promotes potent anti-tumor activity in melanoma. PLOS ONE 9:e87240

Arias-Cartin R, Lyubenova S, Ceccaldi P, Prisner TF, Magalon A, Guigliarelli B, Grimaldi S (2010) HYSCORE evidence that endogenous mena- and ubisemiquinone bind at the same Q site (Q(D)) of Escherichia coli Nitrate Reductase A. J Am Chem Soc 132:5942-5943

Armistead J, Khatkar S, Meyer B, Mark BL, Patel N, Coghlan G, Lamont RE, Liu SB, Wiechert J, Cattini PA, Koetter P, Wrogemann K, Greenberg CR, Entian KD, Zelinski T, Triggs-Raine B (2009) Mutation of a gene essential for ribosome biogenesis, EMG1, causes Bowen-Conradi syndrome. Am J Hum Genet 84:728-739

Armsen W, Himmel B, Betz H, Eulenburg V (2007) The C-terminal PDZ-ligand motif of the neuronal glycine transporter GlyT2 is required for efficient synaptic localization. Mol Cell Neurosci 36:369-380

Arnold P, Himmels P, Weiss S, Decker TM, Markl J, Gatterdam V, Tampé R, Bartholomaus P, Dietrich U, Durr R (2014) Antigenic and 3D structural characterization of soluble X4 and hybrid X4-R5 HIV-1 Env trimers. Retrovirology 11:ArticleNo: 42

Arora A, Suess B (2011) An RNA G-quadruplex in the 3 ' UTR of the proto-oncogene PIM1 represses translation. RNA Biol 8:802-805

Arrey TN, Rietschel B, Papasotiriou DG, Bornemann S, Baeumlisberger D, Karas M, Meyer B (2010) Approaching the complexity of elastase-digested membrane proteomes using Off-Gel IEF/nLC-MALDI-MS/MS. Anal Chem 82:2145-2149

Artelsmair H, Kienberger F, Tinazli A, Schlapak R, Zhu R, Preiner J, Wruss J, Kastner M, Saucedo-Zeni N, Hoelzl M, Rankl C, Baumgartner W, Howorka S, Blaas D, Gruber HJ, Tampé R, Hinterdorfer P (2008) Atomic force microscopy-derived nanoscale chip for the detection of human pathogenic viruses. SMALL 4:847-854

Aschrafi A, Meindl N, Firla B, Brandes RP, Steinhilber D (2006) Intracellular localization of ROR alpha is isoform and cell line-dependent. BBA-Mol Cell Res 1763:805-814

Ashoub A, Beckhaus T, Berberich T, Karas M, Bruggemann W (2013) Comparative analysis of barley leaf proteome as affected by drought stress. Planta 237:771-781

Assmus B, Iwasaki M, Schachinger V, Roexe T, Koyanagi M, Iekushi K, Xu QF, Tonn T, Seifried E, Liebner S, Kranert WT, Grunwald F, Dimmeler S, Zeiher AM (2012) Acute myocardial infarction activates progenitor cells and increases Wnt signalling in the bone marrow. Eur Heart J 33:1911-1919

Assmus B, Leistner DM, Schachinger V, Erbs S, Elsasser A, Haberbosch W, Hambrecht R, Sedding D, Yu JT, Corti R, Mathey DG, Barth C, Mayer-Wehrstein C, Burck I, Sueselbeck T, Dill T, Hamm CW, Tonn T, Dimmeler S, Zeiher AM, Grp R-AS (2014) Long-term clinical outcome after intracoronary application of bone marrow-derived mononuclear cells for acute myocardial infarction: migratory capacity of administered cells determines event-free survival. Eur Heart J 35:1275-1283

Assmus B, Walter DH, Seeger FH, Leistner DM, Steiner J, Ziegler I, Lutz A, Khaled W, Klotsche J, Tonn T, Dimmeler S, Zeiher AM (2013) Effect of shock wave-facilitated intracoronary cell therapy on LVEF in patients with chronic heart failure: The CELLWAVE randomized clinical trial. Jama-J Am Med Assoc 309:1622-1631

Attarbaschi A, Mann G, Konig M, Steiner M, Strehl S, Schreiberhuber A, Schneider B, Meyer C, Marschalek R, Borkhardt A, Pickl WF, Lion T, Gadner H, Haas OA, Dworzak MN, Austrian Berlin-Munster C (2006) Mixed lineage leukemia-rearranged childhood pro-B and CD10-negative pre-B acute lymphoblastic leukemia constitute a distinct clinical entity. Clin Cancer Res 12:2988-2994

Auburger G, Klinkenberg M, Drost J, Marcus K, Morales-Gordo B, Kunz WS, Brandt U, Broccoli V, Reichmann H, Gispert S, Jendrach M (2012) Primary skin fibroblasts as a model of parkinson's disease. Mol Neurobiol 46:20-27

AzimiHashemi N, Erbguth K, Vogt A, Riemensperger T, Rauch E, Woodmansee D, Nagpal J, Brauner M, Sheves M, Fiala A, Kattner L, Trauner D, Hegemann P, Gottschalk A, Liewald J (2014) Synthetic retinal analogs modify the spectral and kinetic characteristics of microbial rhodopsin optogenetic tools. Nat Commun 5:article 5810

Babot M, Labarbuta P, Birch A, Kee S, Fuszard M, Botting CH, Wittig I, Heide H, Galkin A (2014) ND3, ND1 and 39kDa subunits are more exposed in the de-active form of bovine mitochondrial complex I. Biochimica et biophysica acta 1837:929-939

Babuke T, Tikkanen R (2007) Dissecting the molecular function of reggie/flotillin proteins. Eur J Cell Biol 86:525-532

Bachmann J, Bauer B, Zwicker K, Ludwig B, Anderka O (2006) The Rieske protein from Paracoccus denitrificans is inserted into the cytoplasmic membrane by the twin-arginine translocase. FEBS J 273:4817-4830

Baer PC, Bereiter-Hahn J, Missler C, Brzoska M, Schubert R, Gauer S, Geiger H (2009) Conditioned medium from renal tubular epithelial cells initiates differentiation of human mesenchymal stem cells. Cell Proliferat 42:29-37

Baer PC, Bereiter-Hahn J, Schubert R, Geiger H (2006) Differentiation status of human renal proximal and distal tubular epithelial cells in vitro: Differential expression of characteristic markers. Cells Tissues Organs 184:16-22

Baer PC, Schubert R, Bereiter-Hahn J, Plosser M, Geiger H (2009) Expression of a functional epidermal growth factor receptor on human adipose-derived mesenchymal stem cells and its signaling mechanism. Eur J Cell Biol 88:273-283

Baeumlisberger D, Arrey TN, Rietschel B, Rohmer M, Papasotiriou DG, Mueller B, Beckhaus T, Karas M (2010) Labeling elastase digests with TMT: Informational gain by identification of poorly detectable peptides with MALDI-TOF/TOF mass spectrometry. Proteomics 10:3905-3909

Baeumlisberger D, Rohmer M, Arrey TN, Mueller BF, Beckhaus T, Bahr U, Barka G, Karas M (2011) Simple dual-spotting procedure enhances nLC-MALDI MS/MS analysis of digests with less specific enzymes. J Proteome Res 10:2889-2894

Bagert JD, Xie YSJ, Sweredoski MJ, Qi YT, Hess S, Schuman EM, Tirrell DA (2014) Quantitative, time-resolved proteomic analysis by combining bioorthogonal noncanonical amino acid tagging and pulsed stable isotope labeling by amino acids in cell culture. Mol Cell Proteomics 13:1352-1358

Bahr U, Aygun H, Karas M (2008) Detection and relative quantification of siRNA double strands by MALDI mass spectrometry. Anal Chem 80:6280-6285

Bahr U, Aygun H, Karas M (2009) Sequencing of single and double stranded RNA oligonucleotides by acid hydrolysis and MALDI mass spectrometry. Anal Chem 81:3173-3179

Baier J, Gabrielsen M, Oellerich S, Michel H, van Heel M, Cogdell RJ, Kohler J (2009) Spectral diffusion and electron-phonon coupling of the B800 BChl a molecules in LH2 complexes from three different species of purple bacteria. Biophys J 97:2604-2612

Bake V, Roesler S, Eckhardt I, Belz K, Fulda S (2014) Synergistic interaction of Smac mimetic and IFN alpha to trigger apoptosis in acute myeloid leukemia cells. Cancer Lett 355:224-231

Baldauf C, Schrodt S, Herget M, Koch J, Tampé R (2010) Single residue within the antigen translocation complex TAP controls the epitope repertoire by stabilizing a receptive conformation. P Natl Acad Sci USA 107:9135-9140

Baldauf C, Schulze K, Lueders P, Bordignon E, Tampé R (2013) In-situ spin labeling of his-tagged proteins: Distance measurements under in-cell conditions. Chem-Eur J 19:13714-13719

Balgobind BV, Van den Heuvel-Eibrink MM, De Menezes RX, Reinhardt D, Hollink I, Arentsen-Peters S, van Wering ER, Kaspers GJL, Cloos J, de Bont E, Cayuela JM, Baruchel A, Meyer C, Marschalek R, Trka J, Stary J, Beverloo HB, Pieters R, Zwaan CM, den Boer ML (2011) Evaluation of gene expression signatures predictive of cytogenetic and molecular subtypes of pediatric acute myeloid leukemia. Haematol-Hematol J 96:221-230

Balgobind BV, Zwaan CM, Meyer C, Marschalek R, Pieters R, Beverloo HB, Van den Heuvel-Eibrink MM (2009) NRIP3: a novel translocation partner of MLL detected in a pediatric acute myeloid leukemia with complex chromosome 11 rearrangements. Haematol-Hematol J 94:1033-1034

Balgobind BV, Zwaan CM, Reinhardt D, Arentsen-Peters T, Hollink I, de Haas V, Kaspers GJL, de Bont E, Baruchel A, Stary J, Meyer C, Marschalek R, Creutzig U, den Boer ML, Pieters R, van den Heuvel-Eibrink MM (2010) High BRE expression in pediatric MLL-rearranged AML is associated with favorable outcome. Leukemia 24:2048-2055

Bamann C, Bamberg E, Wachtveitl J, Glaubitz C (2014) Proteorhodopsin. BBA-Bioenergetics 1837:614-625

Bamann C, Gueta R, Kleinlogel S, Nagel G, Bamberg E (2010) Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond. Biochemistry 49:267-278

Bamann C, Kirsch T, Nagel G, Bamberg E (2008) Spectral characteristics of the photocycle of channelrhodopsin-2 and its implication for channel function. J Mol Biol 375:686-694

Bamann C, Nagel G, Bamberg E (2010) Microbial rhodopsins in the spotlight. Curr Opin Neurobiol 20:610-6

Bamann C, Sattig T, Bamberg E (2014) Encoding the light-sensitivity of channelrhodopsin-2. Biophys J 106:381A-381A

Bangert A, Cristofanon S, Eckhardt I, Abhari BA, Kolodziej S, Hacker S, Vellanki SHK, Lausen J, Debatin KM, Fulda S (2012) Histone deacetylase inhibitors sensitize glioblastoma cells to TRAIL-induced apoptosis by c-myc-mediated downregulation of cFLIP. Oncogene 31:4677-4688

Barros T, Kühlbrandt W (2009) Crystallisation, structure and function of plant light-harvesting Complex II. BBA-Bioenergetics 1787:753-772

Barros T, Royant A, Standfuss J, Dreuw A, Kühlbrandt W (2009) Crystal structure of plant light-harvesting complex shows the active, energy-transmitting state. EMBO J 28:298-306

Barthelme D, Dinkelaker S, Albers SV, Londei P, Ermler U, Tampé R (2011) Ribosome recycling depends on a mechanistic link between the FeS cluster domain and a conformational switch of the twin-ATPase ABCE1. P Natl Acad Sci USA 108:3228-3233

Barthelme D, Scheele U, Dinkelaker S, Janoschka A, MacMillan F, Albers SV, Driessen AJM, Stagni MS, Bill E, Meyer-Klaucke W, Schunemann V, Tampé R (2007) Structural organization of essential iron-sulfur clusters in the evolutionarily highly conserved ATP-binding cassette protein ABCE1. J Biol Chem 282:14598-14607

Barthelmes K, Reynolds AM, Peisach E, Jonker HRA, DeNunzio NJ, Allen KN, Imperiali B, Schwalbe H (2011) Engineering encodable lanthanide-binding tags into loop regions of proteins. J Am Chem Soc 133:808-819

Bartholomaeus I, Milan-Lobo L, Nicke A, Dutertre S, Hastrup H, Jha A, Gether U, Sitte HH, Betz H, Eulenburg V (2008) Glycine transporter dimers - Evidence for occurrence in the plasma membrane. J Biol Chem 283:10978-10991

Barton B, Rhinow D, Walter A, Schroder R, Benner G, Majorovits E, Matijevic M, Niebel H, Muller H, Haider M, Lacher M, Schmitz S, Holik P, Kühlbrandt W (2011) In-focus electron microscopy of frozen-hydrated biological samples with a Boersch phase plate. Ultramicroscopy 111:1696-705

Barzen S, Rodl CB, Lill A, Steinhilber D, Stark H, Hofmann B (2012) Synthesis and biological evaluation of a class of 5-benzylidene-2-phenyl-thiazolinones as potent 5-lipoxygenase inhibitors. Bioorgan Med Chem 20:3575-3583

Basit F, Cristofanon S, Fulda S (2013) Obatoclax (GX15-070) triggers necroptosis by promoting the assembly of the necrosome on autophagosomal membranes. Cell Death Differ 20:1161-1173

Basit F, Humphreys R, Fulda S (2012) RIP1 protein-dependent assembly of a cytosolic cell death complex is required for inhibitor of apoptosis (IAP) inhibitor-mediated sensitization to lexatumumab-induced apoptosis. J Biol Chem 287:38767-38777

Basting D, Lorch M, Lehner I, Glaubitz C (2008) Transport cycle intermediate in small multidrug resistance protein is revealed by substrate fluorescence. Faseb J 22:365-373

Bats JW, Nasiri HR, Schwalbe H (2006) Isoguanine dihydrochloride dihydrate. Acta Crystallogr E 62:O2040-O2042

Bats JW, Pospiech S, Prisner TF (2010) 1,3,5,7-Tetrakis(4-iodophenyl)adamantane benzene tetrasolvate. Acta Crystallogr E 66:O1636-U1129

Bausen M, Fuhrmann JC, Betz H, O'Sullivan GA (2006) The state of the actin cytoskeleton determines its association with gephyrin: Role of enaNASP family members. Mol Cell Neurosci 31:376-386

Beatty KE, Liu JC, Xie F, Dieterich DC, Schuman EM, Wang Q, Tirrell DA (2006) Fluorescence visualization of newly synthesized proteins in mammalian cells. Angew Chem Int Edit 45:7364-7367

Bechara C, Nöll A, Morgner N, Degiacomi MT, Tampé R, Robinson CV (2015) A subset of annular lipids is linked to the flippase activity of an ABC transporter. Nat Chem:advance online publication 2 February 2015

Becker D, Bereiter-Hahn J, Jendrach M (2009) Functional interaction of the cation channel transient receptor potential vanilloid 4 (TRPV4) and actin in volume regulation. Eur J Cell Biol 88:141-152

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Meyer B, Wurm JP, Kotter P, Leisegang MS, Schilling V, Buchhaupt M, Held M, Bahr U, Karas M, Heckel A, Bohnsack MT, Wöhnert J, Entian KD (2011) The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Psi 1191 in yeast 18S rRNA. Nucleic Acids Res 39:1526-1537

Meyer C, Brieger A, Plotz G, Weber N, Passmann S, Dingermann T, Zeuzem S, Trojan J, Marschalek R (2009) An interstitial deletion at 3p21.3 results in the genetic fusion of MLH1 and ITGA9 in a lynch syndrome family. Clin Cancer Res 15:762-769

Meyer C, Burmeister T, Strehl S, Schneider B, Hubert D, Zach O, Haas O, Klingebiel T, Dingermann T, Marschalek R (2007) Spliced MLL fusions: a novel mechanism to generate functional chimeric MLL-MLLT1 transcripts in t(11;19)(23; p13.3) leukemia. Leukemia 21:588-590

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Meyer C, Kowarz E, Schneider B, Oehm C, Klingebiel T, Dingermann T, Marschalek R (2006) Genomic DNA of leukemic patients: Target for clinical diagnosis of MLL rearrangements. Biotechnol J 1:656-663

Meyer C, Kowarz E, Yip SF, Wan TSK, Chan TK, Dingermann T, Chan LC, Marschalek R (2011) A complex MLL rearrangement identified five years after initial MDS diagnosis results in out-of-frame fusions without progression to acute leukemia. Cancer Genet Cytogen 204:557-562

Meyer C, Schneider B, Jakob S, Strehl S, Attarbaschi A, Schnittger S, Schoch C, Jansen M, Dongen JJM, Boer ML, Pieters R, Ennas MG, Angelucci E, Koehl U, Greil J, Griesinger F, zur Stadt U, Eckert C, Szczepanski T, Niggli FK, Schäfer BW, Kempski H, Brady HJM, Zuna J, Trka J, Nigro LL, Biondi A, Delabesse E, Macintyre E, Stanulla M, Schrappe M, Haas OA, Burmeister T, Dingermann T, Klingebiel T, Marschalek R (2006) The MLL recombinome of acute leukemias. Leukemia 20:777-784

Meyer C, Zur Stadt U, Escherich G, Hofmann J, Binato R, Barbosa TdC, Emerenciano M, Pombo-de-Oliveira MS, Horstmann M, Marschalek R (2013) Refinement of IKZF1 recombination hotspots in pediatric BCP-ALL patients. Am J Blood Res 3:165-173

Meyer T, Gross J, Blanck C, Schmutz M, Ludwig B, Hellwig P, Melin F (2011) Electrochemistry of cytochrome c(1), cytochrome c(552), and Cu(A) from the respiratory chain of thermus thermophilus immobilized on gold nanoparticles. J Phys Chem B 115:7165-7170

Meyer T, Melin F, Xie H, von der Hocht I, Choi SK, Noor MR, Michel H, Gennis RB, Soulimane T, Hellwig P (2014) Evidence for distinct electron transfer processes in terminal oxidases from different origin by means of protein film voltammetry. J Am Chem Soc 136:10854-10857

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Mohl A, Marschalek R, Masszi T, Nagy E, Obser T, Oyen F, Sallai K, Bodo I, Schneppenheim R (2008) An Alu-mediated novel large deletion is the most frequent cause of type 3 von Willebrand disease in Hungary. J Thromb Haemost 6:1729-1735

Mohr A, Albarenque SM, Deedigan L, Yu R, Reidy M, Fulda S, Zwacka RM (2010) Targeting of XIAP Combined with Systemic Mesenchymal Stem Cell-Mediated Delivery of sTRAIL Ligand Inhibits Metastatic Growth of Pancreatic Carcinoma Cells. Stem Cells 28:2109-2120

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Morak M, Meyer C, Marschalek R, Mann G, Haas OA, Panzer-Grumayer R (2013) Clone-specific secondary aberrations are not detected in neonatal blood spots of children with ETV6-RUNX1-positive leukemia. Haematologica 98:E108-E110

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Morgner N, Barth HD, Brutschy B, Scheffer U, Breitung S, Gobel M (2008) Binding sites of the viral RNA element TAR and of TAR mutants for various peptide ligands, probed with LILBID: A new laser mass spectrometry. J Am Soc Mass Spectr 19:1600-1611

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Zoller NN, Kippenberger S, Thaci D, Mewes K, Spiegel M, Sattler A, Schultz M, Bereiter-Hahn J, Kaufmann R, Bernd A (2008) Evaluation of beneficial and adverse effects of glucocorticoids on a newly developed full-thickness skin model. Toxicol In Vitro 22:747-759

Zuna J, Burjanivova T, Mejstrikova E, Zemanova Z, Muzikova K, Meyer C, Horsley SW, Kearney L, Colman S, Ptoszkova H, Marschalek R, Hrusak O, Stary J, Greaves M, Trka J (2009) Covert preleukemia driven by MLL gene fusion. Gene Chromosome Canc 48:98-107

Zuna J, Cave H, Eckert C, Szczepanski T, Meyer C, Mejstrikova E, Fronkova E, Muzikova K, Clappier E, Mendelova D, Boutard P, Schrauder A, Sterba J, Marschalek R, van Dongen JJM, Hrusak O, Stary J, Trka J (2007) Childhood secondary ALL after ALL treatment. Leukemia 21:1431-1435

Zuna J, Zaliova M, Muzikova K, Meyer C, Lizcova L, Zemanova Z, Brezinova J, Votava F, Marschalek R, Stary J, Trka J (2010) Acute leukemias with ETV6/ABL1 (TEL/ABL) fusion: poor prognosis and prenatal origin. Gene Chromosome Canc 49:873-884

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Zutz A, Hoffmann J, Hellmich UA, Glaubitz C, Ludwig B, Brutschy B, Tampé R (2011) Asymmetric ATP hydrolysis cycle of the heterodimeric multidrug ABC transport complex TmrAB from thermus thermophilus. J Biol Chem 286:7104-7115

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